semi-automatic custom-built program Search Results


lsm software  (Carl Zeiss)
96
Carl Zeiss lsm software
Combination and analysis of light and <t>electron</t> <t>microscopy</t> images recorded in the target region: A: 3D rendered fluorescence data set of the target cell. The fluorescence corresponds to the accumulation of internalized virus‐like particles. One layer of none confocal transmission contrast was included, to indicate the outline of the cell. B: Overlay of a single FIB‐SEM section with the corresponding section of the <t>LSM</t> image illustrates the correct guidance of FIB‐SEM imaging by functional fluorescence contrast. Reduced axial resolution of optical imaging results in a prolonged signal distribution along the z‐axis. Bar represents 1 μm. C: 3D FIB‐SEM dataset reveals the complete 3D structure of the virus‐like particles containing compartment (membrane is highlighted in green). D: Detailed view of the segmented compartment. The membrane is coloured in green and virus‐like particles are represented by red spheres.
Lsm Software, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/lsm software/product/Carl Zeiss
Average 96 stars, based on 1 article reviews
lsm software - by Bioz Stars, 2026-04
96/100 stars
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custom-built matlab semi-automatic cell detection gui program  (MathWorks Inc)
90
MathWorks Inc custom-built matlab semi-automatic cell detection gui program
Combination and analysis of light and <t>electron</t> <t>microscopy</t> images recorded in the target region: A: 3D rendered fluorescence data set of the target cell. The fluorescence corresponds to the accumulation of internalized virus‐like particles. One layer of none confocal transmission contrast was included, to indicate the outline of the cell. B: Overlay of a single FIB‐SEM section with the corresponding section of the <t>LSM</t> image illustrates the correct guidance of FIB‐SEM imaging by functional fluorescence contrast. Reduced axial resolution of optical imaging results in a prolonged signal distribution along the z‐axis. Bar represents 1 μm. C: 3D FIB‐SEM dataset reveals the complete 3D structure of the virus‐like particles containing compartment (membrane is highlighted in green). D: Detailed view of the segmented compartment. The membrane is coloured in green and virus‐like particles are represented by red spheres.
Custom Built Matlab Semi Automatic Cell Detection Gui Program, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/custom-built matlab semi-automatic cell detection gui program/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
custom-built matlab semi-automatic cell detection gui program - by Bioz Stars, 2026-04
90/100 stars
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matlab r2017a  (MathWorks Inc)
90
MathWorks Inc matlab r2017a
Quantification of OCT-A Capillary Metrics in Normal and NTG eyes. Measurement of OCT-A capillary metrics are generated from ONH OCT-A images by a semi-automated customized <t>MATLAB</t> program (MATLAB <t>R2017a,</t> The MathWorks, Natick, MA, USA. https://www.mathworks.com/products/matlab.html ). (From left to right) ONH OCT-A images with the cpVD and cpFD measurement region defined. Binarization of the ONH OCT-A images with white pixels representing the blood vessels and black pixels representing the background (non-perfusion regions). Skeletonization of the ONH OCT-A images. Analysis and quantification of cpVD after removal of retinal arterioles and venules from the binarized ONH OCT-A images. Analysis and quantification of cpFD after removal of retinal arterioles and venules from the skeletonized ONH-OCT-A images. (Top: an example of normal eye. Bottom: an example of NTG eye).
Matlab R2017a, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/matlab r2017a/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
matlab r2017a - by Bioz Stars, 2026-04
90/100 stars
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semi-automatic custom-built program  (MathWorks Inc)
90
MathWorks Inc semi-automatic custom-built program
Quantification of OCT-A Capillary Metrics in Normal and NTG eyes. Measurement of OCT-A capillary metrics are generated from ONH OCT-A images by a semi-automated customized <t>MATLAB</t> program (MATLAB <t>R2017a,</t> The MathWorks, Natick, MA, USA. https://www.mathworks.com/products/matlab.html ). (From left to right) ONH OCT-A images with the cpVD and cpFD measurement region defined. Binarization of the ONH OCT-A images with white pixels representing the blood vessels and black pixels representing the background (non-perfusion regions). Skeletonization of the ONH OCT-A images. Analysis and quantification of cpVD after removal of retinal arterioles and venules from the binarized ONH OCT-A images. Analysis and quantification of cpFD after removal of retinal arterioles and venules from the skeletonized ONH-OCT-A images. (Top: an example of normal eye. Bottom: an example of NTG eye).
Semi Automatic Custom Built Program, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/semi-automatic custom-built program/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
semi-automatic custom-built program - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
custom-built matlab program  (MathWorks Inc)
90
MathWorks Inc custom-built matlab program
Quantification of OCT-A Capillary Metrics in Normal and NTG eyes. Measurement of OCT-A capillary metrics are generated from ONH OCT-A images by a semi-automated customized <t>MATLAB</t> program (MATLAB <t>R2017a,</t> The MathWorks, Natick, MA, USA. https://www.mathworks.com/products/matlab.html ). (From left to right) ONH OCT-A images with the cpVD and cpFD measurement region defined. Binarization of the ONH OCT-A images with white pixels representing the blood vessels and black pixels representing the background (non-perfusion regions). Skeletonization of the ONH OCT-A images. Analysis and quantification of cpVD after removal of retinal arterioles and venules from the binarized ONH OCT-A images. Analysis and quantification of cpFD after removal of retinal arterioles and venules from the skeletonized ONH-OCT-A images. (Top: an example of normal eye. Bottom: an example of NTG eye).
Custom Built Matlab Program, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/custom-built matlab program/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
custom-built matlab program - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
custom-built application  (MathWorks Inc)
90
MathWorks Inc custom-built application
Quantification of OCT-A Capillary Metrics in Normal and NTG eyes. Measurement of OCT-A capillary metrics are generated from ONH OCT-A images by a semi-automated customized <t>MATLAB</t> program (MATLAB <t>R2017a,</t> The MathWorks, Natick, MA, USA. https://www.mathworks.com/products/matlab.html ). (From left to right) ONH OCT-A images with the cpVD and cpFD measurement region defined. Binarization of the ONH OCT-A images with white pixels representing the blood vessels and black pixels representing the background (non-perfusion regions). Skeletonization of the ONH OCT-A images. Analysis and quantification of cpVD after removal of retinal arterioles and venules from the binarized ONH OCT-A images. Analysis and quantification of cpFD after removal of retinal arterioles and venules from the skeletonized ONH-OCT-A images. (Top: an example of normal eye. Bottom: an example of NTG eye).
Custom Built Application, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/custom-built application/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
custom-built application - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
custom built, semi-automated matlab program  (MathWorks Inc)
93
MathWorks Inc custom built, semi-automated matlab program
Quantification of OCT-A Capillary Metrics in Normal and NTG eyes. Measurement of OCT-A capillary metrics are generated from ONH OCT-A images by a semi-automated customized <t>MATLAB</t> program (MATLAB <t>R2017a,</t> The MathWorks, Natick, MA, USA. https://www.mathworks.com/products/matlab.html ). (From left to right) ONH OCT-A images with the cpVD and cpFD measurement region defined. Binarization of the ONH OCT-A images with white pixels representing the blood vessels and black pixels representing the background (non-perfusion regions). Skeletonization of the ONH OCT-A images. Analysis and quantification of cpVD after removal of retinal arterioles and venules from the binarized ONH OCT-A images. Analysis and quantification of cpFD after removal of retinal arterioles and venules from the skeletonized ONH-OCT-A images. (Top: an example of normal eye. Bottom: an example of NTG eye).
Custom Built, Semi Automated Matlab Program, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/custom built, semi-automated matlab program/product/MathWorks Inc
Average 93 stars, based on 1 article reviews
custom built, semi-automated matlab program - by Bioz Stars, 2026-04
93/100 stars
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brain vision recorder 1.20 software  (brain products gmbh)
90
brain products gmbh brain vision recorder 1.20 software
Quantification of OCT-A Capillary Metrics in Normal and NTG eyes. Measurement of OCT-A capillary metrics are generated from ONH OCT-A images by a semi-automated customized <t>MATLAB</t> program (MATLAB <t>R2017a,</t> The MathWorks, Natick, MA, USA. https://www.mathworks.com/products/matlab.html ). (From left to right) ONH OCT-A images with the cpVD and cpFD measurement region defined. Binarization of the ONH OCT-A images with white pixels representing the blood vessels and black pixels representing the background (non-perfusion regions). Skeletonization of the ONH OCT-A images. Analysis and quantification of cpVD after removal of retinal arterioles and venules from the binarized ONH OCT-A images. Analysis and quantification of cpFD after removal of retinal arterioles and venules from the skeletonized ONH-OCT-A images. (Top: an example of normal eye. Bottom: an example of NTG eye).
Brain Vision Recorder 1.20 Software, supplied by brain products gmbh, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/brain vision recorder 1.20 software/product/brain products gmbh
Average 90 stars, based on 1 article reviews
brain vision recorder 1.20 software - by Bioz Stars, 2026-04
90/100 stars
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computer software r2009b  (MathWorks Inc)
90
MathWorks Inc computer software r2009b
Quantification of OCT-A Capillary Metrics in Normal and NTG eyes. Measurement of OCT-A capillary metrics are generated from ONH OCT-A images by a semi-automated customized <t>MATLAB</t> program (MATLAB <t>R2017a,</t> The MathWorks, Natick, MA, USA. https://www.mathworks.com/products/matlab.html ). (From left to right) ONH OCT-A images with the cpVD and cpFD measurement region defined. Binarization of the ONH OCT-A images with white pixels representing the blood vessels and black pixels representing the background (non-perfusion regions). Skeletonization of the ONH OCT-A images. Analysis and quantification of cpVD after removal of retinal arterioles and venules from the binarized ONH OCT-A images. Analysis and quantification of cpFD after removal of retinal arterioles and venules from the skeletonized ONH-OCT-A images. (Top: an example of normal eye. Bottom: an example of NTG eye).
Computer Software R2009b, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/computer software r2009b/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
computer software r2009b - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

Image Search Results


Combination and analysis of light and electron microscopy images recorded in the target region: A: 3D rendered fluorescence data set of the target cell. The fluorescence corresponds to the accumulation of internalized virus‐like particles. One layer of none confocal transmission contrast was included, to indicate the outline of the cell. B: Overlay of a single FIB‐SEM section with the corresponding section of the LSM image illustrates the correct guidance of FIB‐SEM imaging by functional fluorescence contrast. Reduced axial resolution of optical imaging results in a prolonged signal distribution along the z‐axis. Bar represents 1 μm. C: 3D FIB‐SEM dataset reveals the complete 3D structure of the virus‐like particles containing compartment (membrane is highlighted in green). D: Detailed view of the segmented compartment. The membrane is coloured in green and virus‐like particles are represented by red spheres.

Journal: Journal of Microscopy

Article Title: Preservation of protein fluorescence in embedded human dendritic cells for targeted 3D light and electron microscopy

doi: 10.1111/jmi.12230

Figure Lengend Snippet: Combination and analysis of light and electron microscopy images recorded in the target region: A: 3D rendered fluorescence data set of the target cell. The fluorescence corresponds to the accumulation of internalized virus‐like particles. One layer of none confocal transmission contrast was included, to indicate the outline of the cell. B: Overlay of a single FIB‐SEM section with the corresponding section of the LSM image illustrates the correct guidance of FIB‐SEM imaging by functional fluorescence contrast. Reduced axial resolution of optical imaging results in a prolonged signal distribution along the z‐axis. Bar represents 1 μm. C: 3D FIB‐SEM dataset reveals the complete 3D structure of the virus‐like particles containing compartment (membrane is highlighted in green). D: Detailed view of the segmented compartment. The membrane is coloured in green and virus‐like particles are represented by red spheres.

Article Snippet: This process was performed in a semiautomated fashion using a custom built plug‐in for the LSM software (Carl Zeiss Microscopy GmbH).

Techniques: Electron Microscopy, Fluorescence, Transmission Assay, Imaging, Functional Assay, Optical Imaging

Quantification of OCT-A Capillary Metrics in Normal and NTG eyes. Measurement of OCT-A capillary metrics are generated from ONH OCT-A images by a semi-automated customized MATLAB program (MATLAB R2017a, The MathWorks, Natick, MA, USA. https://www.mathworks.com/products/matlab.html ). (From left to right) ONH OCT-A images with the cpVD and cpFD measurement region defined. Binarization of the ONH OCT-A images with white pixels representing the blood vessels and black pixels representing the background (non-perfusion regions). Skeletonization of the ONH OCT-A images. Analysis and quantification of cpVD after removal of retinal arterioles and venules from the binarized ONH OCT-A images. Analysis and quantification of cpFD after removal of retinal arterioles and venules from the skeletonized ONH-OCT-A images. (Top: an example of normal eye. Bottom: an example of NTG eye).

Journal: Scientific Reports

Article Title: Global assessment of arteriolar, venular and capillary changes in normal tension glaucoma

doi: 10.1038/s41598-020-75784-1

Figure Lengend Snippet: Quantification of OCT-A Capillary Metrics in Normal and NTG eyes. Measurement of OCT-A capillary metrics are generated from ONH OCT-A images by a semi-automated customized MATLAB program (MATLAB R2017a, The MathWorks, Natick, MA, USA. https://www.mathworks.com/products/matlab.html ). (From left to right) ONH OCT-A images with the cpVD and cpFD measurement region defined. Binarization of the ONH OCT-A images with white pixels representing the blood vessels and black pixels representing the background (non-perfusion regions). Skeletonization of the ONH OCT-A images. Analysis and quantification of cpVD after removal of retinal arterioles and venules from the binarized ONH OCT-A images. Analysis and quantification of cpFD after removal of retinal arterioles and venules from the skeletonized ONH-OCT-A images. (Top: an example of normal eye. Bottom: an example of NTG eye).

Article Snippet: The OCT-A images were exported in grayscale from the built-in software and imported into a semi-automated customized MATLAB program (MATLAB R2017a, MathWorks, Natick, MA, USA) for image analysis.

Techniques: Generated